小提琴图基础#

小提琴图类似于直方图和箱线图,因为它们显示了样本概率分布的抽象表示。与显示落入箱子中的数据点计数或顺序统计量不同,小提琴图使用核密度估计(KDE)来计算样本的经验分布。该计算由几个参数控制。此示例演示了如何修改KDE评估点的数量(points)以及如何修改KDE的带宽(bw_method)。

关于小提琴图和KDE的更多信息,scikit-learn文档有一个很棒的部分:https://scikit-learn.org/stable/modules/density.html

import matplotlib.pyplot as plt
import numpy as np

# Fixing random state for reproducibility
np.random.seed(19680801)


# fake data
fs = 10  # fontsize
pos = [1, 2, 4, 5, 7, 8]
data = [np.random.normal(0, std, size=100) for std in pos]

fig, axs = plt.subplots(nrows=2, ncols=6, figsize=(10, 4))

axs[0, 0].violinplot(data, pos, points=20, widths=0.3,
                     showmeans=True, showextrema=True, showmedians=True)
axs[0, 0].set_title('Custom violin 1', fontsize=fs)

axs[0, 1].violinplot(data, pos, points=40, widths=0.5,
                     showmeans=True, showextrema=True, showmedians=True,
                     bw_method='silverman')
axs[0, 1].set_title('Custom violin 2', fontsize=fs)

axs[0, 2].violinplot(data, pos, points=60, widths=0.7, showmeans=True,
                     showextrema=True, showmedians=True, bw_method=0.5)
axs[0, 2].set_title('Custom violin 3', fontsize=fs)

axs[0, 3].violinplot(data, pos, points=60, widths=0.7, showmeans=True,
                     showextrema=True, showmedians=True, bw_method=0.5,
                     quantiles=[[0.1], [], [], [0.175, 0.954], [0.75], [0.25]])
axs[0, 3].set_title('Custom violin 4', fontsize=fs)

axs[0, 4].violinplot(data[-1:], pos[-1:], points=60, widths=0.7,
                     showmeans=True, showextrema=True, showmedians=True,
                     quantiles=[0.05, 0.1, 0.8, 0.9], bw_method=0.5)
axs[0, 4].set_title('Custom violin 5', fontsize=fs)

axs[0, 5].violinplot(data[-1:], pos[-1:], points=60, widths=0.7,
                     showmeans=True, showextrema=True, showmedians=True,
                     quantiles=[0.05, 0.1, 0.8, 0.9], bw_method=0.5, side='low')

axs[0, 5].violinplot(data[-1:], pos[-1:], points=60, widths=0.7,
                     showmeans=True, showextrema=True, showmedians=True,
                     quantiles=[0.05, 0.1, 0.8, 0.9], bw_method=0.5, side='high')
axs[0, 5].set_title('Custom violin 6', fontsize=fs)

axs[1, 0].violinplot(data, pos, points=80, orientation='horizontal', widths=0.7,
                     showmeans=True, showextrema=True, showmedians=True)
axs[1, 0].set_title('Custom violin 7', fontsize=fs)

axs[1, 1].violinplot(data, pos, points=100, orientation='horizontal', widths=0.9,
                     showmeans=True, showextrema=True, showmedians=True,
                     bw_method='silverman')
axs[1, 1].set_title('Custom violin 8', fontsize=fs)

axs[1, 2].violinplot(data, pos, points=200, orientation='horizontal', widths=1.1,
                     showmeans=True, showextrema=True, showmedians=True,
                     bw_method=0.5)
axs[1, 2].set_title('Custom violin 9', fontsize=fs)

axs[1, 3].violinplot(data, pos, points=200, orientation='horizontal', widths=1.1,
                     showmeans=True, showextrema=True, showmedians=True,
                     quantiles=[[0.1], [], [], [0.175, 0.954], [0.75], [0.25]],
                     bw_method=0.5)
axs[1, 3].set_title('Custom violin 10', fontsize=fs)

axs[1, 4].violinplot(data[-1:], pos[-1:], points=200, orientation='horizontal',
                     widths=1.1, showmeans=True, showextrema=True, showmedians=True,
                     quantiles=[0.05, 0.1, 0.8, 0.9], bw_method=0.5)
axs[1, 4].set_title('Custom violin 11', fontsize=fs)

axs[1, 5].violinplot(data[-1:], pos[-1:], points=200, orientation='horizontal',
                     widths=1.1, showmeans=True, showextrema=True, showmedians=True,
                     quantiles=[0.05, 0.1, 0.8, 0.9], bw_method=0.5, side='low')

axs[1, 5].violinplot(data[-1:], pos[-1:], points=200, orientation='horizontal',
                     widths=1.1, showmeans=True, showextrema=True, showmedians=True,
                     quantiles=[0.05, 0.1, 0.8, 0.9], bw_method=0.5, side='high')
axs[1, 5].set_title('Custom violin 12', fontsize=fs)


for ax in axs.flat:
    ax.set_yticklabels([])

fig.suptitle("Violin Plotting Examples")
fig.subplots_adjust(hspace=0.4)
plt.show()
Violin Plotting Examples, Custom violin 1, Custom violin 2, Custom violin 3, Custom violin 4, Custom violin 5, Custom violin 6, Custom violin 7, Custom violin 8, Custom violin 9, Custom violin 10, Custom violin 11, Custom violin 12

参考文献

以下函数、方法、类和模块的使用在本示例中展示:

由 Sphinx-Gallery 生成的图库