索引

_

__init__() (cdlib.ensemble.BoolParameter method) (cdlib.ensemble.Parameter method) (cdlib.evaluation.FitnessResult method) (cdlib.evaluation.MatchingResult method)

A

add_clustering() (cdlib.TemporalClustering method) add_matching() (cdlib.TemporalClustering method) adjusted_mutual_information() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation) adjusted_rand_index() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation) agdl() (in module cdlib.algorithms) all_flows_null() (in module cdlib.lifecycles) analyze_flow() (cdlib.LifeCycle method) analyze_flows() (cdlib.LifeCycle method) angel() (in module cdlib.algorithms) aslpaw() (in module cdlib.algorithms) async_fluid() (in module cdlib.algorithms) AttrNodeClustering (class in cdlib) available_ground_truths() (in module cdlib.datasets) available_networks() (in module cdlib.datasets) average_internal_degree() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation)

avg_distance() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation) avg_embeddedness() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation) avg_odf() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation) avg_transitivity() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation)

B

bayan() (in module cdlib.algorithms) belief() (in module cdlib.algorithms) bimlpa() (in module cdlib.algorithms)

BiNodeClustering (class in cdlib) bonferroni_post_hoc() (cdlib.evaluation.ComparisonRanking method) (cdlib.evaluation.FitnessRanking method) BoolParameter (class in cdlib.ensemble)

C

cdlib.algorithms module, [1], [2] cdlib.benchmark module cdlib.datasets module cdlib.ensemble module cdlib.evaluation module, [1], [2] cdlib.lifecycles module cdlib.readwrite module cdlib.utils module cdlib.viz module classification_error() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation) clustering_stability_trend() (cdlib.TemporalClustering method) coach() (in module cdlib.algorithms)

ComparisonRanking (class in cdlib.evaluation) compute_events() (cdlib.LifeCycle method) compute_events_from_explicit_matching() (cdlib.LifeCycle method) compute_events_with_custom_matching() (cdlib.LifeCycle method) condor() (in module cdlib.algorithms) conductance() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation) conga() (in module cdlib.algorithms) congo() (in module cdlib.algorithms) convert_graph_formats() (in module cdlib.utils) core_expansion() (in module cdlib.algorithms) cpm() (in module cdlib.algorithms) CPM_Bipartite() (in module cdlib.algorithms) cut_ratio() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation) czekanowski_index() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation)

D

dcs() (in module cdlib.algorithms) demon() (in module cdlib.algorithms) der() (in module cdlib.algorithms) dice_index() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation)

dpclus() (in module cdlib.algorithms)

E

ebgc() (in module cdlib.algorithms) ecs() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation) EdgeClustering (class in cdlib) edges_inside() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation) ego_networks() (in module cdlib.algorithms)

eigenvector() (in module cdlib.algorithms) em() (in module cdlib.algorithms) endntm() (in module cdlib.algorithms) erdos_renyi_modularity() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation) eva() (in module cdlib.algorithms) expansion() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation)

F

f1() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation) fetch_ground_truth_data() (in module cdlib.datasets) fetch_network_data() (in module cdlib.datasets) fetch_network_ground_truth() (in module cdlib.datasets) FitnessRanking (class in cdlib.evaluation) FitnessResult (class in cdlib.evaluation) flake_odf() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation)

flow_null() (in module cdlib.lifecycles) fowlkes_mallows_index() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation) fraction_over_median_degree() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation) frc_fgsn() (in module cdlib.algorithms) friedman_ranking() (cdlib.evaluation.ComparisonRanking method) (cdlib.evaluation.FitnessRanking method) FuzzyNodeClustering (class in cdlib)

G

ga() (in module cdlib.algorithms) gdmp2() (in module cdlib.algorithms) geometric_accuracy() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation) get_attribute() (cdlib.LifeCycle method) get_clustering_at() (cdlib.TemporalClustering method) get_community() (cdlib.TemporalClustering method) get_description() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.EdgeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method)

get_event() (cdlib.LifeCycle method) get_event_types() (cdlib.LifeCycle method) get_events() (cdlib.LifeCycle method) get_explicit_community_match() (cdlib.TemporalClustering method) get_observation_ids() (cdlib.TemporalClustering method) girvan_newman() (in module cdlib.algorithms) graph_entropy() (in module cdlib.algorithms) greedy_modularity() (in module cdlib.algorithms) grid_execution() (in module cdlib.ensemble) grid_search() (in module cdlib.ensemble) GRP() (in module cdlib.benchmark)

H

has_explicit_match() (cdlib.TemporalClustering method) head_tail() (in module cdlib.algorithms) hierarchical_link_community() (in module cdlib.algorithms) hierarchical_link_community_full() (in module cdlib.algorithms) hierarchical_link_community_w() (in module cdlib.algorithms)

hub_dominance() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation)

I

ilouvain() (in module cdlib.algorithms) infomap() (in module cdlib.algorithms) infomap_bipartite() (in module cdlib.algorithms) internal_edge_density() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation)

ipca() (in module cdlib.algorithms)

J

jaccard_index() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation)

K

kclique() (in module cdlib.algorithms)

kcut() (in module cdlib.algorithms)

L

label_propagation() (in module cdlib.algorithms) lais2() (in module cdlib.algorithms) leiden() (in module cdlib.algorithms) lemon() (in module cdlib.algorithms) lfm() (in module cdlib.algorithms) LFR() (in module cdlib.benchmark) LifeCycle (class in cdlib) link_modularity() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation)

louvain() (in module cdlib.algorithms) lpam() (in module cdlib.algorithms) lpanni() (in module cdlib.algorithms) lswl() (in module cdlib.algorithms) lswl_plus() (in module cdlib.algorithms)

M

markov_clustering() (in module cdlib.algorithms) MatchingResult (class in cdlib.evaluation) max_odf() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation) mcode() (in module cdlib.algorithms) mi() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation) mod_m() (in module cdlib.algorithms) mod_r() (in module cdlib.algorithms) modularity_density() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation)

modularity_overlap() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation) module cdlib.algorithms, [1], [2] cdlib.benchmark cdlib.datasets cdlib.ensemble cdlib.evaluation, [1], [2] cdlib.lifecycles cdlib.readwrite cdlib.utils cdlib.viz multicom() (in module cdlib.algorithms)

N

newman_girvan_modularity() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation) nf1() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation) node_perception() (in module cdlib.algorithms)

NodeClustering (class in cdlib) normalized_cut() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation) normalized_mutual_information() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation) nx_node_integer_mapping() (in module cdlib.utils)

O

omega() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation) overlap_quality() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation)

overlapping_normalized_mutual_information_LFK() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation) overlapping_normalized_mutual_information_MGH() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation) overlapping_seed_set_expansion() (in module cdlib.algorithms)

P

Parameter (class in cdlib.ensemble) paris() (in module cdlib.algorithms) partition_closeness_simple() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) percomvc() (in module cdlib.algorithms) plot_com_properties_relation() (in module cdlib.viz) plot_com_stat() (in module cdlib.viz) plot_community_graph() (in module cdlib.viz) plot_event_radar() (in module cdlib.viz) plot_event_radars() (in module cdlib.viz)

plot_flow() (in module cdlib.viz) plot_network_clusters() (in module cdlib.viz) plot_network_highlighted_clusters() (in module cdlib.viz) plot_scoring() (in module cdlib.viz) plot_sim_matrix() (in module cdlib.viz) polytree() (cdlib.LifeCycle method) pool() (in module cdlib.ensemble) pool_grid_filter() (in module cdlib.ensemble) PP() (in module cdlib.benchmark) principled_clustering() (in module cdlib.algorithms) purity() (cdlib.AttrNodeClustering method) (in module cdlib.evaluation) pycombo() (in module cdlib.algorithms)

R

r_spectral_clustering() (in module cdlib.algorithms) rand_index() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation) random_search() (in module cdlib.ensemble) rank() (cdlib.evaluation.ComparisonRanking method) (cdlib.evaluation.FitnessRanking method) rb_pots() (in module cdlib.algorithms) rber_pots() (in module cdlib.algorithms) RDyn() (in module cdlib.benchmark) read_community_csv() (in module cdlib.readwrite) read_community_from_json_string() (in module cdlib.readwrite)

read_community_json() (in module cdlib.readwrite) read_lifecycle_json() (in module cdlib.readwrite) remap_node_communities() (in module cdlib.utils) ricci_community() (in module cdlib.algorithms) rmi() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation) rogers_tanimoto_index() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation) RPG() (in module cdlib.benchmark)

S

sample_expected_sim() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation) SBM() (in module cdlib.benchmark) sbm_dl() (in module cdlib.algorithms) sbm_dl_nested() (in module cdlib.algorithms) scaled_density() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation) scan() (in module cdlib.algorithms) set_attribute() (cdlib.LifeCycle method) siblinarity_antichain() (in module cdlib.algorithms) significance() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation) significance_communities() (in module cdlib.algorithms) size() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation)

slpa() (in module cdlib.algorithms) sorensen_index() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation) southwood_index() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation) spectral() (in module cdlib.algorithms) spinglass() (in module cdlib.algorithms) surprise() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation) surprise_communities() (in module cdlib.algorithms)

T

TemporalClustering (class in cdlib) threshold_clustering() (in module cdlib.algorithms) tiles() (in module cdlib.algorithms) to_edge_community_map() (cdlib.EdgeClustering method) to_json() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.EdgeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.LifeCycle method) (cdlib.NodeClustering method) (cdlib.TemporalClustering method)

to_node_community_map() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) topsis() (cdlib.evaluation.ComparisonRanking method) (cdlib.evaluation.FitnessRanking method) triangle_participation_ratio() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation) typicality_distribution() (in module cdlib.viz)

U

umstmo() (in module cdlib.algorithms)

V

validate_all_flows() (cdlib.LifeCycle method) validate_flow() (cdlib.LifeCycle method) variation_of_information() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation)

W

walkscan() (in module cdlib.algorithms) walktrap() (in module cdlib.algorithms) wCommunity() (in module cdlib.algorithms)

write_community_csv() (in module cdlib.readwrite) write_community_json() (in module cdlib.readwrite) write_lifecycle_json() (in module cdlib.readwrite)

X

XMark() (in module cdlib.benchmark)

Z

z_modularity() (cdlib.AttrNodeClustering method) (cdlib.BiNodeClustering method) (cdlib.FuzzyNodeClustering method) (cdlib.NodeClustering method) (in module cdlib.evaluation)