API参考¶
- fitters
- 单变量模型
- AalenJohansenFitter
- BreslowFlemingHarringtonFitter
- ExponentialFitter
ExponentialFitterExponentialFitter.cumulative_hazard_ExponentialFitter.confidence_interval_cumulative_hazard_ExponentialFitter.hazard_ExponentialFitter.confidence_interval_hazard_ExponentialFitter.survival_function_ExponentialFitter.confidence_interval_survival_function_ExponentialFitter.variance_matrix_ExponentialFitter.median_survival_time_ExponentialFitter.lambda_ExponentialFitter.durationsExponentialFitter.event_observedExponentialFitter.timelineExponentialFitter.entryExponentialFitter.cumulative_density_ExponentialFitter.density_ExponentialFitter.confidence_interval_cumulative_density_ExponentialFitter.percentile()
- GeneralizedGammaFitter
GeneralizedGammaFitterGeneralizedGammaFitter.cumulative_hazard_GeneralizedGammaFitter.hazard_GeneralizedGammaFitter.survival_function_GeneralizedGammaFitter.cumulative_density_GeneralizedGammaFitter.density_GeneralizedGammaFitter.variance_matrix_GeneralizedGammaFitter.median_survival_time_GeneralizedGammaFitter.lambda_GeneralizedGammaFitter.rho_GeneralizedGammaFitter.alpha_GeneralizedGammaFitter.durationsGeneralizedGammaFitter.event_observedGeneralizedGammaFitter.timelineGeneralizedGammaFitter.entryGeneralizedGammaFitter.percentile()
- KaplanMeierFitter
KaplanMeierFitterKaplanMeierFitter.survival_function_KaplanMeierFitter.median_survival_time_KaplanMeierFitter.confidence_interval_KaplanMeierFitter.confidence_interval_survival_function_KaplanMeierFitter.cumulative_density_KaplanMeierFitter.confidence_interval_cumulative_density_KaplanMeierFitter.durationsKaplanMeierFitter.event_observedKaplanMeierFitter.timelineKaplanMeierFitter.entryKaplanMeierFitter.event_tableKaplanMeierFitter.cumulative_density_at_times()KaplanMeierFitter.fit()KaplanMeierFitter.fit_interval_censoring()KaplanMeierFitter.fit_left_censoring()KaplanMeierFitter.median_survival_time_KaplanMeierFitter.plot()KaplanMeierFitter.plot_cumulative_density()KaplanMeierFitter.plot_cumulative_hazard()KaplanMeierFitter.plot_hazard()KaplanMeierFitter.plot_loglogs()KaplanMeierFitter.plot_survival_function()KaplanMeierFitter.survival_function_at_times()
- LogLogisticFitter
LogLogisticFitterLogLogisticFitter.cumulative_hazard_LogLogisticFitter.hazard_LogLogisticFitter.survival_function_LogLogisticFitter.cumulative_density_LogLogisticFitter.density_LogLogisticFitter.variance_matrix_LogLogisticFitter.median_survival_time_LogLogisticFitter.alpha_LogLogisticFitter.beta_LogLogisticFitter.durationsLogLogisticFitter.event_observedLogLogisticFitter.timelineLogLogisticFitter.entryLogLogisticFitter.alpha_LogLogisticFitter.beta_LogLogisticFitter.median_survival_time_LogLogisticFitter.percentile()
- LogNormalFitter
LogNormalFitterLogNormalFitter.cumulative_hazard_LogNormalFitter.hazard_LogNormalFitter.survival_function_LogNormalFitter.cumulative_density_LogNormalFitter.density_LogNormalFitter.variance_matrix_LogNormalFitter.median_survival_time_LogNormalFitter.mu_LogNormalFitter.sigma_LogNormalFitter.durationsLogNormalFitter.event_observedLogNormalFitter.timelineLogNormalFitter.entryLogNormalFitter.median_survival_time_LogNormalFitter.mu_LogNormalFitter.percentile()LogNormalFitter.sigma_
- MixtureCureFitter
MixtureCureFitterMixtureCureFitter.cumulative_hazard_MixtureCureFitter.cured_fraction_MixtureCureFitter.hazard_MixtureCureFitter.survival_function_MixtureCureFitter.cumulative_density_MixtureCureFitter.variance_matrix_MixtureCureFitter.median_survival_time_MixtureCureFitter.durationsMixtureCureFitter.event_observedMixtureCureFitter.timelineMixtureCureFitter.entryMixtureCureFitter.percentile()
- NelsonAalenFitter
NelsonAalenFitterNelsonAalenFitter.cumulative_hazard_NelsonAalenFitter.confidence_interval_NelsonAalenFitter.durationsNelsonAalenFitter.event_observedNelsonAalenFitter.timelineNelsonAalenFitter.entryNelsonAalenFitter.event_tableNelsonAalenFitter.conditional_time_to_event_NelsonAalenFitter.cumulative_hazard_at_times()NelsonAalenFitter.fit()NelsonAalenFitter.percentile()NelsonAalenFitter.plot_hazard()NelsonAalenFitter.smoothed_hazard_()NelsonAalenFitter.smoothed_hazard_confidence_intervals_()
- PiecewiseExponentialFitter
PiecewiseExponentialFitterPiecewiseExponentialFitter.cumulative_hazard_PiecewiseExponentialFitter.hazard_PiecewiseExponentialFitter.survival_function_PiecewiseExponentialFitter.cumulative_density_PiecewiseExponentialFitter.density_PiecewiseExponentialFitter.variance_matrix_PiecewiseExponentialFitter.median_survival_time_PiecewiseExponentialFitter.lambda_i_PiecewiseExponentialFitter.durationsPiecewiseExponentialFitter.event_observedPiecewiseExponentialFitter.timelinePiecewiseExponentialFitter.entryPiecewiseExponentialFitter.breakpoints
- SplineFitter
SplineFitterSplineFitter.cumulative_hazard_SplineFitter.hazard_SplineFitter.survival_function_SplineFitter.cumulative_density_SplineFitter.density_SplineFitter.variance_matrix_SplineFitter.median_survival_time_SplineFitter.lambda_SplineFitter.rho_SplineFitter.durationsSplineFitter.event_observedSplineFitter.timelineSplineFitter.entrySplineFitter.knot_locationsSplineFitter.n_knots
- WeibullFitter
WeibullFitterWeibullFitter.cumulative_hazard_WeibullFitter.hazard_WeibullFitter.survival_function_WeibullFitter.cumulative_density_WeibullFitter.density_WeibullFitter.variance_matrix_WeibullFitter.median_survival_time_WeibullFitter.lambda_WeibullFitter.rho_WeibullFitter.durationsWeibullFitter.event_observedWeibullFitter.timelineWeibullFitter.entryWeibullFitter.lambda_WeibullFitter.percentile()WeibullFitter.rho_
- 回归模型
- AalenAdditiveFitter
AalenAdditiveFitterAalenAdditiveFitter.cumulative_hazards_AalenAdditiveFitter.hazards_AalenAdditiveFitter.confidence_intervals_AalenAdditiveFitter.durationsAalenAdditiveFitter.event_observedAalenAdditiveFitter.weightsAalenAdditiveFitter.concordance_index_AalenAdditiveFitter.fit()AalenAdditiveFitter.plot()AalenAdditiveFitter.predict_cumulative_hazard()AalenAdditiveFitter.predict_expectation()AalenAdditiveFitter.predict_median()AalenAdditiveFitter.predict_percentile()AalenAdditiveFitter.predict_survival_function()AalenAdditiveFitter.print_summary()AalenAdditiveFitter.score()AalenAdditiveFitter.smoothed_hazards_()AalenAdditiveFitter.summary
- CRCSplineFitter
- CoxPHFitter
CoxPHFitterCoxPHFitter.params_CoxPHFitter.hazard_ratios_CoxPHFitter.confidence_intervals_CoxPHFitter.durationsCoxPHFitter.event_observedCoxPHFitter.weightsCoxPHFitter.variance_matrix_CoxPHFitter.strataCoxPHFitter.standard_errors_CoxPHFitter.log_likelihood_CoxPHFitter.AIC_CoxPHFitter.partial_AIC_CoxPHFitter.baseline_hazard_CoxPHFitter.baseline_cumulative_hazard_CoxPHFitter.baseline_survival_CoxPHFitter.summaryCoxPHFitter.plot_covariate_groups()CoxPHFitter.plot_partial_effects_on_outcome()CoxPHFitter.plot()CoxPHFitter.predict_median()CoxPHFitter.predict_expectation()CoxPHFitter.predict_percentile()CoxPHFitter.predict_survival_function()CoxPHFitter.predict_partial_hazard()CoxPHFitter.predict_log_partial_hazard()CoxPHFitter.predict_cumulative_hazard()CoxPHFitter.score()CoxPHFitter.log_likelihood_ratio_test()CoxPHFitter.compute_followup_hazard_ratios()CoxPHFitter.fit()CoxPHFitter.fit_interval_censoring()CoxPHFitter.fit_left_censoring()CoxPHFitter.plot_partial_effects_on_outcome()CoxPHFitter.print_summary()
SemiParametricPHFitterSemiParametricPHFitter.params_SemiParametricPHFitter.hazard_ratios_SemiParametricPHFitter.confidence_intervals_SemiParametricPHFitter.durationsSemiParametricPHFitter.event_observedSemiParametricPHFitter.weightsSemiParametricPHFitter.variance_matrix_SemiParametricPHFitter.strataSemiParametricPHFitter.standard_errors_SemiParametricPHFitter.baseline_hazard_SemiParametricPHFitter.baseline_cumulative_hazard_SemiParametricPHFitter.baseline_survival_SemiParametricPHFitter.concordance_index_SemiParametricPHFitter.fit()SemiParametricPHFitter.log_likelihood_ratio_test()SemiParametricPHFitter.plot()SemiParametricPHFitter.predict_cumulative_hazard()SemiParametricPHFitter.predict_expectation()SemiParametricPHFitter.predict_log_partial_hazard()SemiParametricPHFitter.predict_median()SemiParametricPHFitter.predict_partial_hazard()SemiParametricPHFitter.predict_percentile()SemiParametricPHFitter.predict_survival_function()SemiParametricPHFitter.score()SemiParametricPHFitter.summary
ParametricSplinePHFitter
- CoxTimeVaryingFitter
CoxTimeVaryingFitterCoxTimeVaryingFitter.params_CoxTimeVaryingFitter.hazard_ratios_CoxTimeVaryingFitter.confidence_intervals_CoxTimeVaryingFitter.event_observedCoxTimeVaryingFitter.weightsCoxTimeVaryingFitter.variance_matrix_CoxTimeVaryingFitter.strataCoxTimeVaryingFitter.standard_errors_CoxTimeVaryingFitter.baseline_cumulative_hazard_CoxTimeVaryingFitter.baseline_survival_CoxTimeVaryingFitter.fit()CoxTimeVaryingFitter.log_likelihood_ratio_test()CoxTimeVaryingFitter.plot()CoxTimeVaryingFitter.predict_log_partial_hazard()CoxTimeVaryingFitter.predict_partial_hazard()CoxTimeVaryingFitter.print_summary()CoxTimeVaryingFitter.summary
- GeneralizedGammaRegressionFitter
GeneralizedGammaRegressionFitterGeneralizedGammaRegressionFitter.cumulative_hazard_GeneralizedGammaRegressionFitter.hazard_GeneralizedGammaRegressionFitter.survival_function_GeneralizedGammaRegressionFitter.cumulative_density_GeneralizedGammaRegressionFitter.density_GeneralizedGammaRegressionFitter.variance_matrix_GeneralizedGammaRegressionFitter.median_GeneralizedGammaRegressionFitter.lambda_GeneralizedGammaRegressionFitter.rho_GeneralizedGammaRegressionFitter.alpha_GeneralizedGammaRegressionFitter.durationsGeneralizedGammaRegressionFitter.event_observedGeneralizedGammaRegressionFitter.timelineGeneralizedGammaRegressionFitter.entry
- LogLogisticAFTFitter
LogLogisticAFTFitterLogLogisticAFTFitter.params_LogLogisticAFTFitter.confidence_intervals_LogLogisticAFTFitter.durationsLogLogisticAFTFitter.event_observedLogLogisticAFTFitter.weightsLogLogisticAFTFitter.variance_matrix_LogLogisticAFTFitter.standard_errors_LogLogisticAFTFitter.score_LogLogisticAFTFitter.predict_expectation()LogLogisticAFTFitter.predict_percentile()
- LogNormalAFTFitter
LogNormalAFTFitterLogNormalAFTFitter.params_LogNormalAFTFitter.confidence_intervals_LogNormalAFTFitter.durationsLogNormalAFTFitter.event_observedLogNormalAFTFitter.weightsLogNormalAFTFitter.variance_matrix_LogNormalAFTFitter.standard_errors_LogNormalAFTFitter.score_LogNormalAFTFitter.predict_expectation()LogNormalAFTFitter.predict_percentile()
- PiecewiseExponentialRegressionFitter
- WeibullAFTFitter
WeibullAFTFitterWeibullAFTFitter.params_WeibullAFTFitter.confidence_intervals_WeibullAFTFitter.durationsWeibullAFTFitter.event_observedWeibullAFTFitter.weightsWeibullAFTFitter.variance_matrix_WeibullAFTFitter.standard_errors_WeibullAFTFitter.score_WeibullAFTFitter.predict_expectation()WeibullAFTFitter.predict_percentile()
- AalenAdditiveFitter
- 单变量模型
- utils
add_covariate_to_timeline()concordance_index()covariates_from_event_matrix()datetimes_to_durations()find_best_parametric_model()group_survival_table_from_events()k_fold_cross_validation()median_survival_times()qth_survival_time()qth_survival_times()restricted_mean_survival_time()survival_events_from_table()survival_table_from_events()to_episodic_format()to_long_format()
- statistics
- plotting
- datasets
load_c_botulinum_lag_phase()load_canadian_senators()load_dd()load_dfcv()load_diabetes()load_g3()load_gbsg2()load_holly_molly_polly()load_kidney_transplant()load_larynx()load_lcd()load_leukemia()load_lung()load_lupus()load_lymph_node()load_lymphoma()load_mice()load_multicenter_aids_cohort_study()load_nh4()load_panel_test()load_psychiatric_patients()load_recur()load_regression_dataset()load_rossi()load_stanford_heart_transplants()load_static_test()load_waltons()
- calibration